CDS

Accession Number TCMCG051C13595
gbkey CDS
Protein Id XP_024455782.1
Location join(7300763..7300918,7301010..7301102,7301434..7301526,7301614..7301715,7302272..7302321,7302759..7303517,7304205..7304556,7304634..7304828,7304972..7305121,7305766..7305975,7306400..7306780)
Gene LOC7487392
GeneID 7487392
Organism Populus trichocarpa

Protein

Length 846aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024600014.1
Definition DNA repair protein RAD4 isoform X3 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10838        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03420        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
GOs GO:0000109        [VIEW IN EMBL-EBI]
GO:0000111        [VIEW IN EMBL-EBI]
GO:0000217        [VIEW IN EMBL-EBI]
GO:0000404        [VIEW IN EMBL-EBI]
GO:0000405        [VIEW IN EMBL-EBI]
GO:0000715        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003684        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006294        [VIEW IN EMBL-EBI]
GO:0006298        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030983        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032135        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034644        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065004        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070911        [VIEW IN EMBL-EBI]
GO:0070914        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071942        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1990391        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGACATAGATTGGGAAGATGGTTCGTCTTCCATACTGGGTCATGTAAAAAATCATCCAGGTGATGGCATTAGGGAGGTTACTATTGAATTCAGTGAGTCGCCTGACTCTGCTAAACGGAAGCCCATTCGTCGAGCTACTGCTGAAGAAAAGGGATTGGCTGAGCTTGTGCATAAGGTTCACCTGCTTTGTTTACTTGCAAGGGGCAGAATAATTGATCATGCTTGTGATGATCCTCTCATTCAGGCCTCTTTACTTTCTATTCTACCGGCGCATTTGTCGAATACATTAGGGGACCCTAAACTTCATGCTAAGGCTTTATCTCCTCTTGCCCATTGGTTTCATAATAACTTTCATGTTGCAAGTTCAGTCAGTGAAAAGAGATCATTTCATTCTGCTTTGTCATGTGCTCTTGAAACTCGTGAAGGGACTCTAGAGGAGCTTGCAGCGTTATCTGTGGCACTATTTAGAGCTTTGAAGCTCACAACCCGATTTGTATCCATCCTTGATGTTGCTTCCATAAAACCTGATGCTGACAAATACGAGTCCTTGAGTCAAGGTACAAGTAAAATGCATAGGGGAATATTCAACACTTCAACACTGATGGTGGATAGACCGAAAGAGGTTTTCATACCTCCTAAATCTCTCTCATGTAATGAGAAAAAAAATGTTGCCGAAACCTCATCAAAGACTTCATGCAAAAGTAAAGATAACTGTTCAAGGAGCAAGAAAATTCAATCTAATGATTCTCCTCCTGCTGTTGAACTAAAAGATAAGATGGTAGATACATTTCCATGTGAGGCACAAAATAACACTTCTGAGGAATGTGTTACCAAGAAATCTCAGGGTTCAAAGAGGAAAGGTGATCTTGAGTTTGAGATGCAGTTGCAAATGGCCATGTCTGCAACAGCAGTTGCAACTCAAAGTAACAAAGAATTGGATGTAAAAGAATCAAGTAATTCATCTGATGTCTCTTCTCCATTTAAAAGAATCAGAAAAATTGCAAATGAAGAATCTTCCTCTCAGGGAATCTCGACTGCTCTTGGATCCAGAAAAATAGGATCTCCTCTTTATTGGGCAGAAGTATACTGCAGTGGAGAAAATCTGACAGGAAAGTGGGTGCATGTGGATGCTGTACATGATATTGTAGATGGAGAGCAGAAGGTGGAAGCTGCAGCTGATGCTTGCAAAACATCTCTGAGATATGTAGTTGCTTTTGCTGGGCTTGGGGCTAAAGATGTGACTCGCAGGTACTGTATGAAGTGGTACAAGATAGCATCACAAAGAGTTAACTCGCTTTGGTGGGATGCAGTATTGGCCCCACTGAGAGAGTTAGAGTCAGGAGCAACTGGAGGTATGGCACATTTGGAAAAGCCCCATGCTGATGCCTCAAATGAACATGAAAATGTAATAGCATCAGGATTGTCTGATCTTCCAATGCCGAATGAACTTCCAAGCAATGTTGACTTGCCCAAAGAATCTGGGAGGAAGAATGATGTAGAATCTTCTGGCAGGAATTCTTTTGCTGCTACTAGAAACACTATTGAGGATATGGAATTGCAAACTAGGGCACTAACTGAGCCTCTTCCCACTAATCAGCAGGCATACAAAAATCATTTGCTATATGCAATTGAAAAATGGCTTACAAAGTGTCAAATACTTCATCCTAAGGGTCCTATTCTGGGATTTTGTTCTGGACACCCTGTTTATCCTCGTGCTTGTGTACAGACACTCAGAACAAAAGAGAGATGGCTGCGTGAAGGGCTGCAAGTTAAAGTAAAGGAACTTCCAGCTAAGGTAGTGAAACAATCTGGAAAGCTTAAGAAAGTGCAATTTTCCGAAGATGATGATTATGGTGAGACTGATTCCGGAGTTGTTGAACTTTATGGAATGTGGCAGCTAGAACCCTTGCAACTTCCCCATGCTGTAAATGGGATTGTTCCAAAGAATGAACGAGGTCAAGTTGATGTGTGGTCTGAGAAATGCCTGCCACCAGGGACTGTGCACTTAAGATTGCCAAGGGTATTTTATGTTGCCAAGAGACTGGAAATTGACTATGCACCTGCCATGGTTGGGTTTGAATTTAGAAATGGTAGATCTGTTCCAGTCTTTGATGGAATTGTTGTGTGCAATGAGTTCAAGGATGCAATATTAGAGGCATATGCTGAAGAAGAAGAGAGAAGAGATGCTGAAGAGAAGAAAAGAAATGAAGCGCAAGCTATTTCTAGGTGGTATCAACTTCTTTCATCAATCATAACCAGACAAAGGCTGAACAACTCGTACGGGAATGGTTTGTTGCCTCAAATGCCAAGCAATGTCCAAAATACAAATAACCAGCCGGATGTGCATGTTGGTAGTACACAACCTCCAGGACACCAAAAAGATGCGAAGGATCGTAAGTTAAATGCTCCATCAATGACTCTAACAGATGACCATGAGCATGTGTTTTTGGTAGAGGATCAGAGTTTTGATGAGGAGACCTCAACAAGGACAAAGCGGTGTCATTGTGGATTTTCGGTCCAAGTAGAGGAATTGTAG
Protein:  
MDDIDWEDGSSSILGHVKNHPGDGIREVTIEFSESPDSAKRKPIRRATAEEKGLAELVHKVHLLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNNFHVASSVSEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKYESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSCNEKKNVAETSSKTSCKSKDNCSRSKKIQSNDSPPAVELKDKMVDTFPCEAQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESSNSSDVSSPFKRIRKIANEESSSQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHADASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRTKERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGETDSGVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNNSYGNGLLPQMPSNVQNTNNQPDVHVGSTQPPGHQKDAKDRKLNAPSMTLTDDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL